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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1021373 chr6:26632457 G/A ZNF322B chr9:99957633-99961910:- 0.54 9.9 1.02E-20 Box Plot
BLCA rs10214634 chr6:26564582 T/A ZNF322B chr9:99957633-99961910:- 0.46 8.07 9.07E-15 Box Plot
BLCA rs10216203 chr7:140168158 A/G LOC441455 chr9:99488103-99489749:+ 0.47 5.98 4.98E-9 Box Plot
BLCA rs10228058 chr7:33047249 A/C FKBP9L chr7:55748767-55780945:- 0.36 8.77 6.1E-17 Box Plot
BLCA rs1022853 chr13:109895510 C/T ANKRD10 chr13:111530887-111567416:- -0.73 -5.98 5.02E-9 Box Plot
BLCA rs10230500 chr7:33081018 T/C FKBP9L chr7:55748767-55780945:- 0.27 5.97 5.28E-9 Box Plot
BLCA rs10237371 chr7:42385870 A/G GLYR1 chr16:4853204-4897343:- -0.59 -6.11 2.5E-9 Box Plot
BLCA rs10238911 chr7:33092092 G/A FKBP9L chr7:55748767-55780945:- 0.27 6.06 3.34E-9 Box Plot
BLCA rs10242882 chr7:33062823 G/A FKBP9L chr7:55748767-55780945:- 0.29 6.28 9.39E-10 Box Plot
BLCA rs10243155 chr7:140159721 T/C LOC441455 chr9:99488103-99489749:+ 0.49 6.1 2.65E-9 Box Plot
BLCA rs10251079 chr7:33094982 C/T FKBP9L chr7:55748767-55780945:- 0.28 6.13 2.23E-9 Box Plot
BLCA rs10257079 chr7:140148684 A/G LOC441455 chr9:99488103-99489749:+ -0.5 -5.97 5.44E-9 Box Plot
BLCA rs10258350 chr7:140168639 T/C LOC441455 chr9:99488103-99489749:+ 0.49 6.03 3.77E-9 Box Plot
BLCA rs10262141 chr7:33102712 G/C FKBP9L chr7:55748767-55780945:- 0.27 6.08 2.97E-9 Box Plot
BLCA rs10265315 chr7:33106678 A/G FKBP9L chr7:55748767-55780945:- 0.27 6.07 3.16E-9 Box Plot